Wall of Shame
The following bioRxiv preprints appear to have been posted after acceptance, which is not only deceptive and bad practice, but against bioRxiv policies. Unfortunately these are not the only preprints deserving of shame. Michael Eisen has said that preprints without methods should just be called "ads". John Didion has suggested that these be called "TEDprints". I would also include preprints which don't have data or code in these categories, but I don't have a means for systematically finding "TEDprints", so I can't include them in this list. More information is available at this blog post.
The information presented here can be easily confirmed by following the links. I double checked it but if you notice any errors let me know. One note: I'm using the date of the first preprint version if there are multiple versions.
Long Range Force Transmission in Fibrous Matrices Enabled by Tension-Driven Alignment of Fibers
Accepted: September 18, 2014Posted April 13, 2016.
Tree inference for single-cell data
Accepted: 8 April 2016Posted April 9, 2016.
Structural and kinetic analysis of the COP9-Signalosome activation and the cullin-RING ubiquitin ligase deneddylation cycle
Accepted: March 30, 2016Posted March 30, 2016
Mechanical signals inhibit growth of a grafted tumor in vivo: Proof of Concept
Accepted: March 21, 2016Posted March 24, 2016
Has the time come for preprints in biology?
Accepted: 18 March 2016Posted March 26, 2016
AuPairWise: a method to estimate RNA-seq replicability through co-expression
Accepted: March 14, 2016Posted March 21, 2016
Engineered kinesin motor proteins amenable to small molecule inhibition
Accepted: 26 February 2016Posted March 7, 2016
Structure, inhibition and regulation of two-pore channel TPC1 from Arabidopsis thaliana
Accepted: 02 February 2016Posted February 26, 2016
Reconstruction of ancestral genomes in presence of gene gain and loss.
Online Ahead of Print: February 17, 2016Posted February 19, 2016
Phenotypic plasticity promotes balanced polymorphism in periodic environments by a genomic storage effect
Accepted January 29, 2016Posted February 2, 2016
On the Importance of Hydrodynamic Interactions in the Stepping Kinetics of Kinesin
Publication Date (Web): December 24, 2015Posted January 28, 2016
How do metal ions direct ribozyme folding?
Accepted: 20 July 2015Posted January 26, 2016
On Binocular Vision: The Geometric Horopter and Cyclopean Eye
Accepted 4 November 2015Posted January 18, 2016
Genome Sequences of Populus tremula Chloroplast and Mitochondrion: Implications for Holistic Poplar Breeding
Accepted: December 30, 2015Posted January 4, 2016
Diversity in Clinical and Biomedical Research: A Promise Yet to Be Fulfilled
Published: December 15, 2015Posted December 16, 2015
Evidence of adoption, monozygotic twinning, and low inbreeding rates in a large genetic pedigree of polar bears
Accepted: 15 December 2015Posted December 15, 2015
Proprioceptive feedback determines visuomotor gain inDrosophila
Accepted December 4, 2015Posted December 15, 2015
Modeling error in experimental assays using the bootstrap principle: Understanding discrepancies between assays using different dispensing technologies
Accepted: 7 December 2015Posted December 9, 2015
Evolution arrests invasions of cooperative populations
Published 13 November 2015Posted December 7, 2015
Fitness effects of new mutations in Chlamydomonas reinhardtii across two stress gradients
Manuscript accepted: 02 December 2015Posted December 7, 2015
A reductionist approach to model photosynthetic self-regulation in eukaryotes in response to light
Published online November 27, 2015Posted December 7, 2015
The limitations of in vitro experimentation in understanding biofilms and chronic infection
Accepted 1 September 2015Posted November 26, 2015
Frequency-dependent representation of reinforcement-related information in the human medial and lateral prefrontal cortex
Accepted October 19, 2015Posted November 21, 2015
BRANE Cut: Biologically-Related A priori Network Enhancement with Graph cuts for Gene Regulatory Network Inference
Accepted: 29 September 2015Posted November 20, 2015
Coevolutionary landscape inference and the context-dependence of mutations in beta-lactamase TEM-1
Published: 06 October 2015Posted October 13, 2015
Exact solutions of coupled multispecies linear reaction-diffusion equations on a uniformly growing domain
Accepted: September 4, 2015Posted September 7, 2015
Cationic Peptides Facilitate Iron-induced Mutagenesis in Bacteria
Accepted: September 1, 2015Posted September 3, 2015
Statistical Colocalization of Genetic Risk Variants for Related Autoimmune Diseases in the Context of Common Controls
Accepted: 08 May 2015Posted June 8, 2015
Worldwide population structure, long term demography, and local adaptation of Helicobacter pylori
Accepted May 15, 2015Posted May 18, 2015
Open science resources for the discovery and analysis of Tara Oceans Data
Accepted: 27 April 2015Posted May 8, 2015
Pathway based factor analysis of gene expression data produces highly heritable phenotypes that associate with age
Accepted March 5, 2015Posted March 6, 2015
Phen-Gen: Combining Phenotype and Genotype to Analyze Rare Disorders
Accepted: 16 June 2014Posted February 26, 2015
A Pleiotropy-Informed Bayesian False Discovery Rate adapted to a Shared Control Design Finds New Disease Associations From GWAS Summary Statistics
Accepted: November 25, 2014Posted February 4, 2015
A mechanistic link between cellular trade-offs, gene expression and growth
Approved January 20, 2015Posted February 3, 2015
Folding of Aquaporin 1: Multiple evidence that helix 3 can shift out of the membrane core
Manuscript accepted: 24 April 2014Posted January 23, 2015
The positive inside rule is stronger when followed by a transmembrane helix.
Accepted 3 June 2014Posted January 23, 2015
SWS2 visual pigment evolution as a test of historically contingent patterns of plumage color evolution in Warblers
Manuscript accepted: 19 November 2014Posted January 9, 2015
Multi -omics and metabolic modelling pipelines: challenges and tools for systems microbiology
Accepted 3 January 2015Posted January 7, 2015
Genetic landscape of populations along the Silk Road: admixture and migration patterns
Accepted: 19 November 2014Posted November 24, 2014
Triticeae resources in Ensembl Plants
Accepted: 12 November 2014Posted November 18, 2014
Human Cytomegalovirus Intrahost Evolution--A New Avenue for Understanding and Controlling Herpesvirus Infections
Accepted 2 August 2014Posted September 25, 2014
WFABC: a Wright-Fisher ABC-based approach for inferring effective population sizes and selection coefficients from time-sampled data
Manuscript accepted: 04 May 2014Posted September 26, 2014
Quantitative Genetics and Modularity in cranial and mandibular morphology of Calomys expulsus
Accepted: 11 August 2014Posted August 19, 2014
Ontogeny of aerial righting and wing flapping in juvenile birds
Accepted August 6, 2014Posted August 6, 2014
Characterization of the Peer Review Network at the Center for Scientific Review, National Institutes of Health
Accepted: July 7, 2014Posted July 26, 2014
Concerning RNA-Guided Gene Drives for the Alteration of Wild Populations
Accepted: July 9, 2014Posted July 17, 2014
The dynamics of sperm cooperation in a competitive environment
Accepted June 25, 2014Posted July 3, 2014
Some plants dont play games: An ideal free distribution explains the root production of plants that do not engage in a tragedy of the commons game.
Manuscript accepted: 08 April 2014Posted May 6, 2014
MOSAIC EPIGENETIC DYSREGULATION OF ECTODERMAL CELLS IN AUTISM SPECTRUM DISORDER
Accepted: April 9, 2014Posted May 6, 2014
Evolutionary Multiplayer Games
First Online: 27 March 2014Posted April 15, 2014
Comparison of the theoretical and real-world evolutionary potential of a genetic circuit.
Accepted 5 March 2014Posted April 2, 2014
Hydrogen peroxide thermochemical oscillator as driver for primordial RNA replication
Accepted February 25, 2014Posted March 17, 2014
The emergence of the rescue effect from explicit within- and between-patch dynamics in a metapopulation
Accepted January 14, 2014Posted January 15, 2014
Genetic drift opposes mutualism during spatial population expansion
Approved November 30, 2013Posted February 25, 2014
Genetic drift suppresses bacterial conjugation in spatially structured populations
Accepted: January 10, 2014Posted February 24, 2014
Broadly tuned and respiration-independent inhibition in the olfactory bulb of awake mice
Accepted: 04 February 2014Posted February 6, 2014
Holsteins Favor Heifers, Not Bulls: Biased Milk Production Programmed during Pregnancy as a Function of Fetal Sex
Accepted: December 6, 2013Posted January 24, 2014
A model of flux regulation in the cholesterol biosynthesis pathway: Immune mediated graduated flux reduction versus statin-like led stepped flux reduction
Accepted 18 May 2012Posted November 14, 2013
Noise Control In Gene Regulatory Networks With Negative Feedback
Publication Date (Web): April 19, 2016Posted April 20, 2016
How life history can sway the fixation probability of mutants
Accepted April 22, 2016Posted April 28, 2016
Stay tuned: active amplification tunes tree cricket ears to track temperature-dependent song frequency
Accepted April 4, 2016Posted April 27, 2016
Rescuing perishable neuroanatomical information from a threatened biodiversity hotspot: Remote field methods for brain tissue preservation validated by cytoarchitectonic analysis, immunohistochemistry, and X-ray microcomputed tomography
Accepted: May 4, 2016Posted May 11, 2016
Self-driven jamming in growing microbial populations
Accepted 23 March 2016Posted May 11, 2016
3D perception of maximum density zone on Ramachandran plots for Zika virus protein structures
Final Accepted: 26 April 2016Posted May 12, 2016
Large scale chromosome folding is stable against local changes in chromatin structure
Accepted: May 17, 2016Posted May 18, 2016
Isolation and characterization of electrochemically active subsurface Delftia and Azonexus species
Accepted: 05 May 2016Posted May 21, 2016
Prospects of genomic prediction in the USDA Soybean Germplasm Collection: Historical data creates robust models for enhancing selection of accessions.
Accepted May 23, 2016Posted May 24, 2016
Structure of complement C3(H2O) revealed by quantitative cross-linking/mass spectrometry and modeling
First Published on June 1, 2016Posted June 1, 2016
FF12MC: A revised AMBER forcefield and new protein simulation protocol
Manuscript accepted: 18 June 2016Posted June 29, 2016
ADPriboDB: The Database of ADP-ribosylated Proteins
Accepted: 13 July 2016Posted July 13, 2016
Quantitative, image-based phenotyping methods provide insight into spatial and temporal dimensions of plant disease
Accepted July 19, 2016Posted July 22, 2016
Sensitivity in binding free energies due to protein reorganization
Publication Date (Web): 27 Jul 2016Posted July 28, 2016
PathScore: a web tool for identifying altered pathways in cancer data
Accepted: 21 June 2016Posted August 1, 2016
Ultraslow water-mediated transmembrane interactions regulate the activation of A2Aadenosine receptor
Accepted: August 2, 2016Posted August 4, 2016
Emergent rules for codon choice elucidated by editing rare arginine codons in Escherichia coli
Approved July 29, 2016Posted August 14, 2016
Molecular signatures associated with ZIKV exposure in human cortical neural progenitors
Accepted: 22 August 2016Posted August 23, 2016
HiChIP: Efficient and sensitive analysis of protein-directed genome architecture
Accepted: 10 August 2016Posted September 8, 2016
ATX-2, the C. elegans Ortholog of Human Ataxin-2, Regulates Centrosome Size and Microtubule Dynamics
Accepted: September 16, 2016Posted September 21, 2016
Genome-wide association study of HIV whole genome sequences validated using drug resistance
Accepted: September 13, 2016Posted September 20, 2016
Using predictive specificity to determine when gene set analysis is biologically meaningful
Accepted: 10 October 2016Posted October 10, 2016
Hi-C-constrained physical models of human chromosomes recover functionally-related properties of genome organization
Accepted 30 September 2016Posted October 17, 2016
Tomographic docking suggests the mechanism of auxin receptor TIR1 selectivity
Accepted September 22, 2016Posted October 18, 2016
Inhibition of microbial biofuel production in drought stressed switchgrass hydrolysate
Accepted: 25 October 2016Posted October 26, 2016
Unexpected diversity in socially synchronized rhythms of shorebirds
Accepted 21 October 2016Posted November 1, 2016
Engineering Genetically-Encoded Mineralization and Magnetism via Directed Evolution
Accepted 02 November 2016Posted November 2, 2016
A mouse model of hereditary hemorrhagic telangiectasia generated by transmammary-delivered immunoblocking of BMP9 and BMP10
Accepted 27 October 2016Posted November 2, 2016
Cell wall remodeling drives engulfment during Bacillus subtilis sporulation
Accepted: November 14, 2016Posted November 15, 2016
A computational method for the investigation of multistable systems and its application to genetic switches
Accepted: 13 November 2016Posted November 16, 2016
Chromatin environment, transcriptional regulation, and splicing distinguish lincRNAs and mRNAs
Accepted November 9, 2016Posted November 17, 2016
New single nucleotide polymorphisms (SNPs) in homologous recombination repair genes detected by microarray analysis in Polish breast cancer patients
Accepted: 14 November 2016Posted November 21, 2016
Cell Cycle Constraints and Environmental Control of Local DNA Hypomethylation in Alpha-Proteobacteria
Accepted: November 22, 2016Posted December 6, 2016
Decoding Single Molecule Time Traces with Dynamic Disorder
Accepted: December 7, 2016Posted December 8, 2016
Microbial Genome-Wide Association Studies: Lessons from Human GWAS
Published: 14 November 2016Posted December 11, 2016
Quantifying the Heat Dissipation from Molecular Motor's Transport Properties in Nonequilibrium Steady States
Publication Date (Web): December 16, 2016Posted December 17, 2016
A SUMO-Ubiquitin Relay Recruits Proteasomes to Chromosome Axes to Regulate Meiotic Recombination
Accepted for publication December 14, 2016Posted December 21, 2016
Histone H3K4 and H3K36 methylation promotes recruitment, but not activity, of the NuA3 histone acetyltransferase complex in S. cerevisiae
Accepted December 23, 2016Posted December 23, 2016
Highly-efficient Cpf1-mediated gene targeting in mice following high concentration pronuclear injection
Accepted December 20, 2016Posted December 28, 2016
Fine-scale human population structure in southern Africa reflects ecogeographic boundaries
Accepted July 7, 2016Posted January 9, 2017
Multivariate cross-frequency coupling via generalized eigendecomposition
Accepted: January 8, 2017Posted January 9, 2017
Comprehensive characterization of neutrophil genome topology
Accepted January 5, 2017Posted January 15, 2017
Literature Consistency of Bioinformatics Sequence Databases is Effective for Assessing Record Quality
Accepted: 20 February 2017Posted February 23, 2017
Structure of the Full-length VEGFR-1 Extracellular Domain in Complex with VEGF-A
Accepted: December 21, 2016Posted January 24, 2017
An inducible CRISPR-ON system for controllable gene activation in human pluripotent stem cells
Accepted December 1, 2016Posted February 5, 2017
Genetic basis of melanin pigmentation in butterfly wings
Accepted February 6, 2017Posted February 7, 2017
A Mixture Copula Bayesian Network Model for Multimodal Genomic Data
Accepted: February 20, 2017Posted February 22, 2017
Locomotion induces stimulus-specific response enhancement in adult visual cortex
Accepted February 18, 2017Posted February 22, 2017
Effects of Social Organization, Trap Arrangement and Density, Sampling Scale, and Population Density on Bias in Population Size Estimation Using Some Common Mark-Recapture Estimators
Accepted: February 22, 2017Posted March 6, 2017
Embryonic loss of human females with partial trisomy 19 identifies region critical for the single active X
Accepted: January 4, 2017Posted March 22, 2017
Physiological Preparation Of Hair Cells From The Sacculus Of The American Bullfrog (Rana catesbeiana)
Published: 3/17/2017Posted March 29, 2017
Ultrasensitivity and Fluctuations in the Barkai-Leibler Model of Chemotaxis Receptors in Escherichia coli
Accepted: March 23, 2017Posted March 31, 2017
Improved Outcome And Cost Effectiveness In Ablation Of Persistent Atrial Fibrillation Under General Anaesthetic
Accepted: 15 February 2017Posted April 3, 2017
Tissue adaptation: implications for gut immunity and tolerance
Accepted: April 4, 2017Posted April 8, 2017
GlnK facilitates the dynamic regulation of bacterial nitrogen assimilation
Accepted: April 14, 2017Posted April 15, 2017
Does tobacco abstinence decrease reward sensitivity? A human laboratory test
Accepted: 02 August 2016Posted April 19, 2017
Development of a Self-Report Measure of Reward Sensitivity: A Test in Current and Former Smokers
Accepted: 07 October 2016Posted April 20, 2017
Whole-Brain Serial-Section Electron Microscopy In Larval Zebrafish
Accepted 11 April 2017Posted May 7, 2017
Revealing Complete Complex KIR Haplotypes Phased By Long-Read Sequencing Technology
Accepted 31 March 2017Posted May 8, 2017
Torque and buckling in stretched intertwined double-helix DNAs
Published 1 May 2017Posted May 9, 2017
Facilitated Dissociation Of Transcription Factors From Single DNA Binding Sites
Published ahead of print March 31, 2017Posted May 9, 2017
Prominent Lateral Spread Of Imaged Evoked Activity Beyond Cortical Columns In Barrel Cortex Provides Foundation For Coding Whisker Identity
Accepted: 12 May 2017Posted May 12, 2017
Genetic Load Makes Cancer Cells More Sensitive To Common Drugs: Evidence From Cancer Cell Line Encyclopedia
Accepted 07 April 2017Posted May 17, 2017
Phosphate Is The Third Nutrient Monitored By TOR In Candida albicans And Provides A Target For Fungal-Specific Indirect TOR Inhibition
Approved April 27, 2017Posted May 27, 2017
Global biogeography since Pangaea
Accepted May 9, 2017Posted June 7, 2017
Addressing current challenges in cancer immunotherapy with mathematical and computational modeling
Accepted May 31, 2017Posted June 9, 2017
Space, Time and Episodic Memory: the Hippocampus is all over the Cognitive Map
Manuscript accepted: 12 June 2017Posted June 14, 2017
DNA isolation protocol effects on nuclear DNA analysis by microarrays, droplet digital PCR, and whole genome sequencing, and on mitochondrial DNA copy number estimation
Accepted: June 15, 2017Posted June 16, 2017
Bridging the dynamics and organization of chromatin domains by mathematical modeling
Accepted 28 Mar 2017Posted June 18, 2017
Functional selectivity for face processing in the temporal voice area of early deaf individuals
Approved May 31, 2017Posted June 23, 2017
mRNA detection in budding yeast with single fluorophores
Accepted: 21 June 2017Posted June 24, 2017
The independent influences of age and education on functional brain networks and cognition in healthy older adults
Manuscript accepted: 22 June 2017Posted June 25, 2017
Enhanced neuronal regeneration in the CAST/Ei mouse strain is linked to expression of differentiation markers after injury
Accepted: July 6, 2017Posted July 6, 2017
Printed Droplet Microfluidics for on demand dispensing of picoliter droplets and cells
Approved July 10, 2017Posted July 21, 2017
Remodeling of ER-exit sites initiates a membrane supply pathway for autophagosome biogenesis
Accepted June 28, 2017Posted July 25, 2017
Mathematical modeling of tumor-tumor distant interactions supports a systemic control of tumor growth
Accepted July 11, 2017Posted July 26, 2017
Functional corticostriatal connection topographies predict goal directed behaviour in humans
Accepted 13 June 2017Posted July 27, 2017
Suppression of Transposable Elements in Leukemic Stem Cells
Accepted 23 June 2017Posted July 28, 2017
Are allocentric spatial reference frames compatible with theories of Enactivism?
Accepted: 25 July 2017Posted July 31, 2017
Global and local excitation and inhibition shape the dynamics of the cortico-striatal-thalamo-cortical pathway
Accepted 19 June 2017Posted August 8, 2017
Development of Inflammatory Bowel Disease is Linked to a Longitudinal Restructuring of the Gut Metagenome in Mice
Accepted August 8, 2017Posted August 8, 2017
Measuring functional connectivity in stroke: approaches and considerations
Accepted: March 20, 2017Posted August 17, 2017
SFMetaDB: A Comprehensive Annotation of Mouse RNA Splicing Factor RNA-Seq Datasets
Accepted: 15 August 2017Posted August 18, 2017
Non-contact measurement of emotional and physiological changes in heart rate from a webcam
Manuscript accepted: 09 August 2017Posted August 23, 2017
An improved ATAC-seq protocol reduces background and enables interrogation of frozen tissues
Accepted 11 July 2017Posted August 26, 2017
Analysis of deep learning methods for blind protein contact prediction in CASP12
Manuscript accepted: 25 August 2017Posted August 28, 2017
On the Structure and Mechanism of Two-Pore Channels
Manuscript accepted: 23 June 2017Posted August 29, 2017
Temporal dissociation of salience and prediction error responses to appetitive and aversive taste
Manuscript accepted: 14 July 2017Posted September 7, 2017
Crossing enhanced and high fidelity SpCas9 nucleases to optimize specificity and cleavage
Accepted: 11 September 2017Posted September 12, 2017
Pathways of DNA unlinking: A story of stepwise simplification
Accepted 01 September 2017Posted September 14, 2017
Deep learning of the splicing (epi)genetic code reveals a novel candidate mechanism linking histone modifications to ESC fate decision
Accepted: 15 September 2017Posted September 15, 2017
PharmacoDB: an integrative database for mining in vitro anticancer drug screening studies
Accepted: 27 September 2017Posted September 27, 2017
Methods in field chronobiology
Accepted: 8 January 2017Posted October 2, 2017
Mechanics and buckling of biopolymeric shells and cell nuclei
Accepted: August 22, 2017Posted October 2, 2017
Evolution-informed forecasting of seasonal influenza A (H3N2)
Accepted for publication August 16, 2017Posted October 4, 2017
Idiosyncratic genome degradation in a bacterial endosymbiont of periodical cicadas
Accepted: October 3, 2017Posted October 7, 2017
How the human brain introspects about one's own episodes of cognitive control
Accepted 16 October 2017Posted October 25, 2017
Acute memory deficits in chemotherapy-treated adults
Accepted 23 Feb 2017Posted November 7, 2017
Presence of Atopy Increases the Risk of Asthma Relapse
Accepted September 11, 2017Posted November 10, 2017
On the proportional abundance of species: Integrating population genetics and community ecology
Accepted 21 November 2017Posted November 21, 2017
Analysis of fMRI data using noise-diffusion network models: a new covariance-coding perspective
Accepted: 21 November 2017Posted November 23, 2017
Static and dynamic measures of human brain connectivity predict complementary aspects of human cognitive performance
Accepted: 04 August 2017Posted November 25, 2017
Neuronal glutamate transporters control dopaminergic signaling and compulsive behaviors
Accepted December 1, 2017Posted December 3, 2017
Modeling the Structural Origins of Drug Resistance to Isoniazid via key Mutations in Mycobacterium tuberculosis Catalase-Peroxidase, KatG
Accepted: November 17, 2017Posted December 7, 2017
Rapid adaptation in large populations with very rare sex: scalings and spontaneous oscillations
Available online 12 December 2017Posted December 13, 2017
Shape-related characteristics of age-related differences in subcortical structures
Accepted 10 Dec 2017Posted December 13, 2017
CLIQ-BID: A method to quantify bacteria-induced damage to eukaryotic cells by automated live-imaging of bright nuclei
Accepted 07 December 2017Posted December 18, 2017
B1a B cells require autophagy for metabolic homeostasis and self-renewal
Accepted: December 12, 2017Posted December 28, 2017
Identifying and exploiting trait-relevant tissues with multiple functional annotations in genome-wide association studies
Accepted: January 4, 2018Posted January 4, 2018
Dissociation of immediate and delayed effects of emotional arousal on episodic memory
Accepted 27 December 2017Posted January 4, 2018
Chromatin configuration affects the dynamics and distribution of a transiently interacting protein
Accepted: December 27, 2017Posted January 10, 2018
Quantitative super-resolution single molecule microscopy dataset of YFP-tagged growth factor receptors
Accepted: 10 January 2018Posted January 11, 2018
Predicting age from cortical structure across the lifespan
Manuscript accepted: 15 January 2018Posted January 16, 2018
Enabling the hypothesis-driven prioritization of ligand candidates in big databases: Screenlamp and its application to GPCR inhibitor discovery for invasive species control
Accepted: 17 January 2018Posted January 17, 2018
CITGeneDB: A comprehensive database of human and mouse genes enhancing or suppressing cold-induced thermogenesis validated by perturbation experiments in mice
Accepted: 18 January 2018Posted January 19, 2018
Key components of the delirium syndrome and mortality: greater impact of acute change and disorganised thinking in a prospective cohort study
Accepted: 16 January 2018Posted January 22, 2018
Exploring Approximate Bayesian Computation for inferring recent demographic history with genomic markers in non-model species
Manuscript accepted: 16 January 2018Posted January 24, 2018
On the design of CRISPR-based single cell molecular screens
Accepted 06 January 2018Posted January 29, 2018
GEOMetaCuration: A web-based application for accurate manual curation of Gene Expression Omnibus metadata
Accepted: 30 January 2018Posted January 31, 2018
Zebrafish sp7 mutants show tooth cycling independent of attachment, eruption and poor differentiation of teeth
Accepted 30 January 2018Posted February 2, 2018
Protein-ligand interfaces are polarized: Discovery of a strong trend for intermolecular hydrogen bonds to favor donors on the protein side with implications for predicting and designing ligand complexes
Accepted: 5 February 2018Posted February 5, 2018
Transcranial direct current stimulation over left inferior frontal cortex improves speech fluency in adults who stutter
Accepted: 01 December 2017Posted February 6, 2018
Whole genome analysis illustrates global clonal population structure of the ubiquitous dermatophyte pathogen
Trichophyton rubrum
Accepted February 7, 2018Posted February 8, 2018
Identification of piRNA binding sites reveals the Argonaute regulatory landscape of the C. elegans germline
Accepted: January 31, 2018Posted February 7, 2018
Conserved Roles of C. elegans and Human MANFs in Sulfatide Binding and Cytoprotection
Accepted 02 February 2018Posted February 11, 2018
Torso-like is a component of the hemolymph and regulates the insulin signalling pathway in
Drosophila
Accepted February 12, 2018Posted February 12, 2018
Swedish Nerve Growth Factor Mutation (NGFR100W) Defines a Role for TrkA and p75NTR in Nociception
Accepted February 12, 2018Posted February 16, 2018
Validation of Davson's equation in patients suffering from idiopathic Normal Pressure Hydrocephalus
Accepted: 10 February 2018Posted February 20, 2018
Effect of 5-trans isomer of arachidonic acid on model liposomal membranes studied by a combined simulation and experimental approach
Accepted: 8 March 2018Posted March 9, 2018
Interaction of diabetes and smoking on stroke: A population-based cross-sectional survey in China
Accepted March 1, 2018Posted March 9, 2018
Positional information specifies the site of organ regeneration and not tissue maintenance in planarians
Accepted: March 15, 2018Posted March 15, 2018
Ligand binding and conformational changes of SUR1 subunit in pancreatic ATP-sensitive potassium channels
Accepted March 14, 2018Posted March 16, 2018
The expansion in lymphoid organs of IL-4+ BATF+ T follicular helper cells is linked to IgG4 class switching in vivo
Accepted March 19, 2018Posted March 19, 2018
Establishment of signaling interactions with cellular resolution for every cell cycle of embryogenesis
Accepted March 19, 2018Posted March 19, 2018
SPORTS1.0: a tool for annotating and profiling non-coding RNAs optimized for rRNA- and tRNA- derived small RNAs
Accepted 7 April 2018Posted April 7, 2018
MECHANOSENSATION DYNAMICALLY COORDINATES POLAR GROWTH AND CELL WALL ASSEMBLY TO PROMOTE CELL SURVIVAL
Accepted: March 26, 2018Posted April 10, 2018
One prophage WO gene rescues cytoplasmic incompatibility in Drosophila melanogaster
Approved March 16, 2018Posted April 13, 2018
Induction of muscle stem cell quiescence by the secreted niche factor Oncostatin M
Accepted 16 March 2018Posted April 18, 2018
Quantification of biases in predictions of protein stability changes upon mutations
Accepted: 25 April 2018Posted April 25, 2018
Detecting differential transcription factor activity from ATAC-seq data
Accepted: 6 May 2018Posted May 6, 2018
Putting hands to rest: efficient deep CNN-RNN architecture for chemical named entity recognition with no hand-crafted rules.
Accepted: 14 May 2018Posted May 14, 2018
A robust ex vivo experimental platform for molecular-genetic dissection of adult human neocortical cell types and circuits
Accepted 16 May 2018Posted May 18, 2018
A data mining paradigm for identifying key factors in biological processes using gene expression data
Accepted 21 May 2018Posted May 21, 2018
Variation of mutational burden in healthy human tissues suggests non-random strand segregation and allows measuring somatic mutation rates
Accepted: May 25, 2018Posted May 29, 2018
On an algorithmic definition for the components of the minimal cell
Accepted: May 15, 2018Posted May 30, 2018
Identification of a novel tetrameric structure for human apolipoprotein-D
Accepted 30 May 2018Posted May 31, 2018
Identification of piRNA binding sites reveals the Argonaute regulatory landscape of the C. elegans germline
Accepted: January 31, 2018Posted February 7, 2018
